PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.3G421800.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 166aa    MW: 17721.2 Da    PI: 11.9149
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.3G421800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.7e-1261110150
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         e++ +r rrk++NRe+ArrsR+RK+  +eeL+ ++  L a N++L+ +l 
  Sevir.3G421800.1.p  61 EAAERRLRRKISNRESARRSRARKQRHLEELRARAGRLRAGNSELAARLR 110
                         567799***************************************99886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-960113No hitNo description
SMARTSM003381.3E-961125IPR004827Basic-leucine zipper domain
PfamPF001701.1E-862111IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.07163126IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.46E-865113No hitNo description
PROSITE patternPS0003606883IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MTPQLPPLSD PALEAFLADI GFGLVPDEPL DVTTTTTTTT TMAATRPEEE TSASAAAAGD  60
EAAERRLRRK ISNRESARRS RARKQRHLEE LRARAGRLRA GNSELAARLR GVQARAALVR  120
LTNARLRAEA GALGRRLAAA QRAIALRQIY AGGGFELQAL ASLIV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17784RRSRARKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012700164.11e-109PREDICTED: ocs element-binding factor 1-like
TrEMBLK3ZCP81e-109K3ZCP8_SETIT; Uncharacterized protein
STRINGSi024325m1e-108(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP151251919